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DNA PHASING SERVICE

Separate Your DNA Into Maternal & Paternal Lines

Discover which traits and ancestries you inherited from each parent. Our phasing service creates two separate files?one for each parental contribution?enabling deeper genealogical insights and clearer family connections.

? 28.00
Starting price Includes Starter Pack
Separate maternal/paternal
Up to 99% accuracy (with parents)
~48h turnaround
Phasing Visualization
Your DNA
Mixed maternal + paternal
Parent 1
Maternal Line
Parent 2
Paternal Line

What is DNA Phasing?

Understanding Phasing

You inherit 50% of your DNA from each parent. Through phasing, we create two separate RAW files, each representing the genetic contribution from one parent. This allows you to determine which traits or ancestries you inherited from your maternal or paternal side.

DNA phasing is particularly valuable for ancestry and genetic genealogy because it allows you to determine the specific ancestry and DNA matches that you inherited from each parent. This separation provides clearer insights into your family history.

Important Note

In Duo or Trio phasing, the phased files contain only the shared SNPs between the child's file and the parents' files. SNPs that are not shared cannot be phased. We strongly recommend using the same testing company for the child and the parents for best results.

Phasing Options

Choose the method that works best for your situation

Statistical
~90% Accuracy

Phasing Without Parents

Uses population-level haplotype patterns to statistically separate your chromosomes into maternal and paternal contributions.

  • Separate maternal/paternal DNA
  • No parental samples needed
  • Some ancestry noise expected
Duo
~98% Accuracy

Child + One Parent

With one parent's DNA, we can definitively assign which chromosomes came from that parent and which from the other.

  • Precise parent identification
  • 99% separated ancestry
  • Parent 1 = provided parent
Trio
~99% Accuracy

Child + Both Parents

With both parents' DNA, achieve the highest possible accuracy for complete parental separation.

  • Complete parental separation
  • Near-complete ancestry accuracy
  • Highest precision possible

How It Works

Simple three-step process to separate your parental DNA

Phasing Workflow
Share Your Files
Upload RAW files
Child + parents
Specify Options
Choose phasing type
Statistical/Duo/Trio
Receive Results
Two phased files
~48 hours

What Happens Inside the Pipeline

The statistical phasing pipeline runs on research-grade bioinformatics infrastructure. Here's what actually runs when you submit a file.

Statistical Phasing Workflow
Input File
Your raw DNA data
Any major provider
Pre-processing
VCF conversion & filters
Remove Y/MT, fix ploidy
Beagle Phasing
1KG Phase 3 reference
Chr 1-22 + X
Haplotype Split
VCF → parental RAW files
One file per haplotype
Merge with Original
Homozygous SNPs added back
RawDnaMerger
Output Files
Parent 1 + Parent 2
Two RAW ZIP files
Technical Deep Dive For Researchers

Pre-processing

The raw file is converted to VCF against the GRCh37 reference. Three normalisation filters run before Beagle sees any data.

  • Y and MT chromosomes removed
  • Haploid calls normalised to diploid
  • Isolated edge markers trimmed

Phasing Engine

Beagle 5.4 runs in phasing-only mode (impute=false) per chromosome against the 1000 Genomes Phase 3 reference panel.

  • 1KG Phase 3 bref3 reference
  • GRCh37 genetic maps
  • Chr 1-22 + X phased

Post-phasing Merge

Each phased VCF is split into two parental haplotype RAW files. Homozygous SNPs from the original file are added back; remaining heterozygous calls are set to no-call.

  • Per-haplotype RAW conversion
  • Homozygous SNPs re-merged
  • Unresolvable hets → no-call

Reference Panel

The reference panel provides the haplotype templates used to statistically infer parental contributions.

  • 1000 Genomes Phase 3
  • 2,504 individuals, 26 populations
  • GRCh37 / hg19
# Statistical phasing workflow
Input: raw_genotypes.txt
Step 1: Convert to VCF; remove Y/MT; normalise ploidy; trim edge markers
Step 2: Phase with Beagle 5.4 (impute=false) against 1000G (chr 1-22 + X)
Step 3: Split phased VCFs into Parent1 and Parent2 haplotype RAW files
Step 4: Merge parental files with homozygous SNPs from original sample
Step 5: Set remaining heterozygous genotypes to no-call
Output: Parent1.zip + Parent2.zip

Supported DNA Test Providers

AncestryDNA 23andMe MyHeritage FamilyTreeDNA LivingDNA WeGene Nebula Genomics Dante Labs 24Genetics

What You'll Receive

Service Includes

  • Two phased RAW files (Parent 1, Parent 2)
  • Starter Pack for each phased file
  • Processing within 48 hours
  • Comprehensive parental ancestry insights

Usage Scenarios

  • DNAGENICS Analysis ? separate reports per parent
  • Ancestry Research ? distinct maternal/paternal breakdown
  • Genealogy ? clearer DNA match assignments
  • Third-party platforms ? GEDmatch, MyTrueAncestry

Service Options

Choose your phasing method

Phasing Without Parents

?28.00
One-time payment
30% off with code: EASTER30
  • Statistical phasing (~90% accuracy)
  • Two separate parental files
  • Starter Pack included
  • Fast processing (~48h)
  • Secure handling
  • Technical support
Order Now
Most Accurate

Phasing With Parents

?28.00
One-time payment
30% off with code: EASTER30
  • Duo/Trio phasing (up to 99%)
  • Two separate parental files
  • Starter Pack included
  • Fast processing (~48h)
  • Secure handling
  • Technical support
Order Now

Frequently Asked Questions

Why do I need to test my parents when I can phase my own DNA?

Each phased file only contains 50% of each parent's DNA?the portion you inherited. To get their full genetic information, you still need to test your parents directly. Phasing reveals which half you got from each, but not the half you didn't inherit.

What determines Parent 1 vs Parent 2?

In Duo Phasing, Parent 1 refers to the parent whose RAW file you provided. In Trio Phasing, Parent 1 is the first file you select during ordering, and Parent 2 is the second. When phasing without parents, we can't determine which side belongs to each parent?labels are arbitrary.

What about shared SNPs?

The phased files will only include SNPs that are shared between the child's and parents' files. Any SNPs not present in both files cannot be phased and won't be included. This is why we recommend using the same testing company for all family members.

Can I rephase a previously phased file?

Once a phased file (either Parent 1 or Parent 2) has been created, it cannot be rephased. Phased files represent a single haplotype and cannot be separated further. You would need to use your original, unphased RAW file for any new phasing requests.

Things to Know

Technical Details

  • Phasing covers chromosomes 1-22 and X
  • Process takes up to 48 hours
  • Best results when all tests are from the same company
  • For ancestry and genealogy purposes only
  • Once phased, files cannot be rephased

Legal Information

Start Your DNA Phasing Today

Discover your parental genetic heritage with separated maternal and paternal files